MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
4_5BalbC4O2_S4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 228
bases: 2,789,951 bps
CDS: 2,555
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,625
Total number of protein coding genes annotated/found:
2,555
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5052|JADGLS010000208.1
SEQF5052_02624
Genome Viewer
NA
AA
1269/423
169132-170400
L-threonine dehydratase biosynthetic IlvA
SEQF5052|JADGLS010000208.1
SEQF5052_02623
Genome Viewer
NA
AA
573/191
168545-169117
3-isopropylmalate dehydratase small subunit
SEQF5052|JADGLS010000208.1
SEQF5052_02622
Genome Viewer
NA
AA
1371/457
167174-168544
3-isopropylmalate dehydratase large subunit
SEQF5052|JADGLS010000208.1
SEQF5052_02621
Genome Viewer
NA
AA
1047/349
166114-167160
3-isopropylmalate dehydrogenase
SEQF5052|JADGLS010000208.1
SEQF5052_02620
Genome Viewer
NA
AA
1530/510
164582-166111
2-isopropylmalate synthase
SEQF5052|JADGLS010000208.1
SEQF5052_02619
Genome Viewer
NA
AA
1005/335
163548-164552
Ketol-acid reductoisomerase (NADP(+))
SEQF5052|JADGLS010000208.1
SEQF5052_02618
Genome Viewer
NA
AA
255/85
163157-163411
hypothetical protein
SEQF5052|JADGLS010000208.1
SEQF5052_02617
Genome Viewer
NA
AA
1770/590
161388-163157
Acetolactate synthase large subunit
SEQF5052|JADGLS010000208.1
SEQF5052_02616
Genome Viewer
NA
AA
1689/563
159672-161360
Dihydroxy-acid dehydratase
SEQF5052|JADGLS010000208.1
SEQF5052_02615
Genome Viewer
NA
AA
495/165
159194-158700
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
SEQF5052|JADGLS010000208.1
SEQF5052_02614
Genome Viewer
NA
AA
663/221
158719-158057
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
SEQF5052|JADGLS010000208.1
SEQF5052_02613
Genome Viewer
NA
AA
465/155
158084-157620
[Ribosomal protein S18]-alanine N-acetyltransferase
SEQF5052|JADGLS010000208.1
SEQF5052_02612
Genome Viewer
NA
AA
1026/342
157627-156602
tRNA N6-adenosine threonylcarbamoyltransferase
SEQF5052|JADGLS010000208.1
SEQF5052_02611
Genome Viewer
NA
AA
1611/537
154890-156500
DNA mismatch repair protein MutS
SEQF5052|JADGLS010000208.1
SEQF5052_02610
Genome Viewer
NA
AA
1929/643
152601-154529
putative ABC transporter ATP-binding protein YheS
SEQF5052|JADGLS010000208.1
SEQF5052_02609
Genome Viewer
NA
AA
636/212
152348-151713
Redox-sensing transcriptional repressor Rex
SEQF5052|JADGLS010000208.1
SEQF5052_02608
Genome Viewer
NA
AA
1074/358
151409-150336
hypothetical protein
SEQF5052|JADGLS010000208.1
SEQF5052_02607
Genome Viewer
NA
AA
225/75
150271-150047
Putative sulfur carrier protein YeeD
SEQF5052|JADGLS010000208.1
SEQF5052_02606
Genome Viewer
NA
AA
1251/417
149840-148590
Ammonium transporter
SEQF5052|JADGLS010000208.1
SEQF5052_02605
Genome Viewer
NA
AA
951/317
148407-147457
HTH-type transcriptional regulator TreR
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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